MLOC_11914 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains126.66890.214290.282104.952
LEAShoots from the seedlings (10 cm shoot stage)85.586377.615780.144269.6018
INF1Young developing inflorescences (5mm)69.514481.64187.420572.9879
INF2Developing inflorescences (1-1.5 cm)113.18798.9278112.119125.125
ROORoots from the seedlings (10 cm shoot stage)213.55153.284137.432192.058
NODDeveloping tillers at six leaf stage, 3rd internode157.295203.102288.385703.198
CAR5Developing grain, bracts removed (5 DPA)102.746111.719103.305111.296
CAR15Developing grain, bracts removed (15 DPA)68.519873.166975.5299181.311



CDS Structure of MLOC_11914






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11914.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252313.1NoneNoneNoneNone
MLOC_11914.1CUST_95_PI427708083AvailableAvailablecontig_1562135 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g38550.2 +2 9e-103 302 155/169 (92%) 13105.m04045 protein ubiquitin-conjugating enzyme, putative, expressed
TAIR PP10 AT5G59300.1 +2 3e-93 278 139/171 (81%) | Symbols: UBC7, ATUBC7 | ubiquitin carrier protein 7 | chr5:23919868-23921304 REVERSE LENGTH=203