MLOC_11898 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains66.836934.590134.317239.6586
LEAShoots from the seedlings (10 cm shoot stage)15.43839.5867210.7179.31046
INF1Young developing inflorescences (5mm)89.235699.293888.919772.4769
INF2Developing inflorescences (1-1.5 cm)70.574982.5018123.63691.0403
ROORoots from the seedlings (10 cm shoot stage)55.666840.640466.902648.4496
NODDeveloping tillers at six leaf stage, 3rd internode9.695311.729116.76935.5429
CAR5Developing grain, bracts removed (5 DPA)52.212559.693842.591946.5892
CAR15Developing grain, bracts removed (15 DPA)5.981724.626244.6949911.603



CDS Structure of MLOC_11898






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11898.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_11898.1CUST_11348_PI427708083AvailableAvailablecontig_1562103 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g39410.1 -3 5e-15 69 32/32 (100%) 13110.m03607 protein Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed
TAIR PP10 AT1G07660.2 -3 2e-15 69 32/32 (100%) Histone superfamily protein | chr1:2369212-2369523 FORWARD LENGTH=86