MLOC_11897 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.87326.146955.400225.75622
LEAShoots from the seedlings (10 cm shoot stage)3.6629111.95916.694266.51057
INF1Young developing inflorescences (5mm)0.09489290.02477220.1220760.0730334
INF2Developing inflorescences (1-1.5 cm)0.1044280.05715020.1974030.119079
ROORoots from the seedlings (10 cm shoot stage)4.057195.631147.082567.30325
NODDeveloping tillers at six leaf stage, 3rd internode00.0288370.03935520.16347
CAR5Developing grain, bracts removed (5 DPA)0.02436110.06678340.05395970.0515041
CAR15Developing grain, bracts removed (15 DPA)0.025186800.03706160.0636804



CDS Structure of MLOC_11897






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11897.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365167NoneNoneNoneNone
MLOC_11897.1CUST_1090_PI427708080AvailableAvailablecontig_1562103 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g37620.1 +3 0.0 902 437/519 (84%) 13109.m03733 protein flavin-containing monooxygenase family protein, putative, expressed
TAIR PP10 AT1G19250.1 +3 2e-114 357 199/525 (38%) | Symbols: FMO1 | flavin-dependent monooxygenase 1 | chr1:6650656-6653053 REVERSE LENGTH=530