MLOC_11896 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.354863.02022.510052.86103
LEAShoots from the seedlings (10 cm shoot stage)0.9048413.998554.70572.81288
INF1Young developing inflorescences (5mm)0.07366480.05044750.06280840.0528405
INF2Developing inflorescences (1-1.5 cm)0.08726650.09862890.0887660.103428
ROORoots from the seedlings (10 cm shoot stage)0.2495550.8644510.5125090.965335
NODDeveloping tillers at six leaf stage, 3rd internode00.003190210.01623370.0311534
CAR5Developing grain, bracts removed (5 DPA)0.1262930.09201460.2251390.142925
CAR15Developing grain, bracts removed (15 DPA)0.07960350.02735390.07865450.143225



CDS Structure of MLOC_11896






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11896.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250915.1NoneNoneNoneNone
MLOC_11896.2CUST_1089_PI427708080AvailableAvailablecontig_1562103 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g37620.1 +3 0.0 945 452/518 (87%) 13109.m03733 protein flavin-containing monooxygenase family protein, putative, expressed
TAIR PP10 AT1G19250.1 +3 1e-116 363 202/524 (39%) | Symbols: FMO1 | flavin-dependent monooxygenase 1 | chr1:6650656-6653053 REVERSE LENGTH=530