- Predicted Gene MLOC_11892
MLOC_11892 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 12.2155 | 14.2017 | 14.1315 | 14.6308 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 9.59824 | 1.32035 | 1.78779 | 3.78498 |
| INF1 | Young developing inflorescences (5mm) | 24.1604 | 23.7547 | 23.6047 | 20.9142 |
| INF2 | Developing inflorescences (1-1.5 cm) | 23.1483 | 28.9721 | 28.4093 | 30.8741 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 5.52707 | 8.37478 | 8.43525 | 10.2097 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 5.31648 | 4.49843 | 3.72351 | 15.3422 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 9.8922 | 9.74476 | 8.10651 | 9.55389 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.508491 | 0.285489 | 0.540687 | 1.05991 |
CDS Structure of MLOC_11892
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_11892.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g32350.1 |
+3 |
0.0 |
658 |
382/514 (74%) |
13105.m03329 protein zinc finger, C3HC4 type domain containing protein, expressed |
| TAIR PP10 |
AT5G45290.1 |
+3 |
7e-82 |
275 |
175/297 (59%) |
RING/U-box superfamily protein | chr5:18350011-18352092 REVERSE LENGTH=545 |