- Predicted Gene MLOC_11890
MLOC_11890 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_11890_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_11890_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 176.396 | 122.166 | 138.563 | 155.177 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 227.673 | 158.463 | 211.051 | 180.907 |
INF1 | Young developing inflorescences (5mm) | 61.2108 | 56.8276 | 91.0512 | 67.0456 |
INF2 | Developing inflorescences (1-1.5 cm) | 28.9306 | 33.9664 | 37.5077 | 40.9989 |
ROO | Roots from the seedlings (10 cm shoot stage) | 742.781 | 446.837 | 360.562 | 617.705 |
NOD | Developing tillers at six leaf stage, 3rd internode | 376.035 | 380.455 | 100.796 | 1062.4 |
CAR5 | Developing grain, bracts removed (5 DPA) | 119.032 | 117.875 | 114.563 | 130.919 |
CAR15 | Developing grain, bracts removed (15 DPA) | 12.9563 | 18.3479 | 13.4992 | 40.7602 |
CDS Structure of MLOC_11890
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_11890.6
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g50240.1 |
+3 |
0.0 |
692 |
321/344 (93%) |
13102.m05701 protein glutamine synthetase, catalytic domain containing protein, expressed |
TAIR PP10 |
AT5G37600.1 |
+3 |
0.0 |
656 |
298/344 (87%) |
| Symbols: ATGSR1, GLN1;1, GSR 1, ATGLN1;1 | glutamine synthase clone R1 | chr5:14933574-14935656 REVERSE LENGTH=356 |