- Predicted Gene MLOC_11875
MLOC_11875 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 38.4394 | 47.1564 | 43.5839 | 38.7281 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 37.5936 | 16.8749 | 25.0928 | 21.7448 |
INF1 | Young developing inflorescences (5mm) | 17.4727 | 14.387 | 15.6775 | 11.5111 |
INF2 | Developing inflorescences (1-1.5 cm) | 15.4768 | 18.1589 | 19.4205 | 16.56 |
ROO | Roots from the seedlings (10 cm shoot stage) | 28.0795 | 31.0369 | 30.4386 | 32.4943 |
NOD | Developing tillers at six leaf stage, 3rd internode | 32.327 | 29.2053 | 20.098 | 84.6101 |
CAR5 | Developing grain, bracts removed (5 DPA) | 32.4129 | 35.3183 | 35.9925 | 28.5859 |
CAR15 | Developing grain, bracts removed (15 DPA) | 6.48124 | 7.75843 | 7.4167 | 13.3232 |
CDS Structure of MLOC_11875
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_11875.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g67870.1 |
+2 |
0.0 |
852 |
426/519 (82%) |
13101.m07381 protein expressed protein |
TAIR PP10 |
AT2G19880.2 |
+2 |
0.0 |
733 |
367/523 (70%) |
Nucleotide-diphospho-sugar transferases superfamily protein | chr2:8581578-8585118 FORWARD LENGTH=520 |