MLOC_11873 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.513773.713974.113993.12267
LEAShoots from the seedlings (10 cm shoot stage)9.1808516.79778.807488.69098
INF1Young developing inflorescences (5mm)0.1848080.1969110.1157760.135412
INF2Developing inflorescences (1-1.5 cm)0.1634050.4667620.3890770.337484
ROORoots from the seedlings (10 cm shoot stage)10.53369.126977.382079.70393
NODDeveloping tillers at six leaf stage, 3rd internode1.126781.284670.9973933.45004
CAR5Developing grain, bracts removed (5 DPA)9.201329.626599.69298.45376
CAR15Developing grain, bracts removed (15 DPA)2.479673.028813.760326.21113



CDS Structure of MLOC_11873






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11873.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK359978NoneNoneNoneNone
MLOC_11873.1CUST_1077_PI427708080AvailableAvailablecontig_1562036 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g01410.1 -2 0.0 646 314/337 (93%) 13108.m00061 protein phosphate/phosphoenolpyruvate translocator-related protein, putative, expressed
TAIR PP10 AT1G77610.1 -2 0.0 568 277/332 (83%) EamA-like transporter family protein | chr1:29165489-29167486 FORWARD LENGTH=336