MLOC_11868 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains000.06597040.0952421
LEAShoots from the seedlings (10 cm shoot stage)0.7420770.294030.2675320.40494
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)00.03546770.07442040.0758378
ROORoots from the seedlings (10 cm shoot stage)0.1910750.1003660.3535170.206883
NODDeveloping tillers at six leaf stage, 3rd internode0.03783350.02743560.5216520.417846
CAR5Developing grain, bracts removed (5 DPA)0.7891691.099641.032841.12471
CAR15Developing grain, bracts removed (15 DPA)2.121422.103182.350335.66525



CDS Structure of MLOC_11868






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11868.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250889.1NoneNoneNoneNone
MLOC_11868.1CUST_1075_PI427708080AvailableAvailablecontig_1562016 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g16900.1 +2 0.0 863 422/447 (94%) 13103.m02014 protein rab GDP dissociation inhibitor alpha, putative, expressed
TAIR PP10 AT5G09550.1 +2 0.0 753 363/441 (82%) GDP dissociation inhibitor family protein / Rab GTPase activator family protein | chr5:2963850-2966465 FORWARD LENGTH=445