MLOC_11832 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains15.075613.832715.626913.8743
LEAShoots from the seedlings (10 cm shoot stage)14.16586.953977.907548.28333
INF1Young developing inflorescences (5mm)37.213141.353949.457733.2561
INF2Developing inflorescences (1-1.5 cm)69.653551.465659.449462.2902
ROORoots from the seedlings (10 cm shoot stage)10.442113.741813.871415.2848
NODDeveloping tillers at six leaf stage, 3rd internode13.194416.074518.585154.0386
CAR5Developing grain, bracts removed (5 DPA)16.105517.569317.458815.785
CAR15Developing grain, bracts removed (15 DPA)12.98419.8070114.514725.7612



CDS Structure of MLOC_11832






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11832.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376724NoneNoneNoneNone
MLOC_11832.1CUST_1072_PI427708080AvailableAvailablecontig_1561903 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g57920.1 +1 0.0 605 316/476 (66%) 13101.m06149 protein OsFBL3 - F-box domain and LRR containing protein, expressed
TAIR PP10 AT4G00315.1 +1 3e-19 91 102/360 (28%) F-box/RNI-like/FBD-like domains-containing protein | chr4:137404-138888 FORWARD LENGTH=441