MLOC_11813 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.195895.102665.441334.75702
LEAShoots from the seedlings (10 cm shoot stage)5.385714.165554.05373.93267
INF1Young developing inflorescences (5mm)20.280921.11922.339716.8792
INF2Developing inflorescences (1-1.5 cm)24.341222.885823.015924.6684
ROORoots from the seedlings (10 cm shoot stage)2.982444.844272.703095.21411
NODDeveloping tillers at six leaf stage, 3rd internode0.9304282.34337.7216510.7869
CAR5Developing grain, bracts removed (5 DPA)6.462666.996967.390296.54048
CAR15Developing grain, bracts removed (15 DPA)4.604573.528533.188248.43573



CDS Structure of MLOC_11813






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11813.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_11813.2CUST_8843_PI427708080AvailableAvailablecontig_1561877 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g01689.1 -3 0.0 1016 512/578 (89%) 13101.m00095 protein phosphatidylinositol 3- and 4-kinase family protein, expressed
TAIR PP10 AT3G48190.1 -3 0.0 885 438/579 (76%) | Symbols: ATM, ATATM | ataxia-telangiectasia mutated | chr3:17797628-17828361 FORWARD LENGTH=3845