MLOC_11806 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains64.496668.251867.581358.0918
LEAShoots from the seedlings (10 cm shoot stage)63.901616.34621.778227.4316
INF1Young developing inflorescences (5mm)67.194269.167262.032449.42
INF2Developing inflorescences (1-1.5 cm)52.018557.980555.799852.6455
ROORoots from the seedlings (10 cm shoot stage)42.582648.222947.464445.8579
NODDeveloping tillers at six leaf stage, 3rd internode72.450562.344550.254166.275
CAR5Developing grain, bracts removed (5 DPA)87.049777.869380.49767.9879
CAR15Developing grain, bracts removed (15 DPA)12.275611.433210.868423.9769



CDS Structure of MLOC_11806






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11806.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357747NoneNoneNoneNone
MLOC_11806.1CUST_1071_PI427708080AvailableAvailablecontig_1561867 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g37520.1 +2 0.0 824 426/456 (93%) 13110.m03404 protein major facilitator superfamily domain-containing protein 5, putative, expressed
TAIR PP10 AT1G64650.1 +2 0.0 726 372/462 (81%) Major facilitator superfamily protein | chr1:24023805-24026336 REVERSE LENGTH=462