- Predicted Gene MLOC_11805
MLOC_11805 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 14.1303 | 9.38875 | 10.7722 | 9.86344 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 7.32438 | 8.83562 | 10.2285 | 6.25336 |
| INF1 | Young developing inflorescences (5mm) | 8.80446 | 8.29343 | 8.81942 | 6.78117 |
| INF2 | Developing inflorescences (1-1.5 cm) | 5.4919 | 6.99081 | 4.91984 | 6.02932 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 16.9824 | 13.4092 | 12.2906 | 13.2802 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 4.21099 | 3.91886 | 9.29538 | 12.5678 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 9.36577 | 9.59878 | 10.1769 | 8.42467 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.26492 | 3.14791 | 3.2676 | 7.29159 |
CDS Structure of MLOC_11805
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_11805.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os10g37530.1 |
+3 |
2e-77 |
246 |
160/191 (84%) |
13110.m03406 protein mitochondrial import inner membrane translocase subunit Tim17, putative, expressed |
| TAIR PP10 |
AT1G72750.1 |
+3 |
1e-45 |
160 |
107/184 (58%) |
| Symbols: ATTIM23-2, TIM23-2 | translocase inner membrane subunit 23-2 | chr1:27383577-27384143 FORWARD LENGTH=188 |
