MLOC_11773 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.1859110.49998.781059.17217
LEAShoots from the seedlings (10 cm shoot stage)7.40423.322355.255954.45258
INF1Young developing inflorescences (5mm)44.491849.562779.508450.9322
INF2Developing inflorescences (1-1.5 cm)166.214111.172133.408152.57
ROORoots from the seedlings (10 cm shoot stage)30.495623.421225.125128.2881
NODDeveloping tillers at six leaf stage, 3rd internode13.869415.817817.375448.1144
CAR5Developing grain, bracts removed (5 DPA)19.055216.397215.933917.1206
CAR15Developing grain, bracts removed (15 DPA)83.156399.682687.8424224.404



CDS Structure of MLOC_11773






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11773.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366139NoneNoneNoneNone
MLOC_11773.1CUST_17904_PI427708080AvailableAvailablecontig_1561802 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g23350.1 -1 0.0 1445 709/875 (81%) 13109.m02204 protein trehalose synthase, putative, expressed
TAIR PP10 AT1G68020.2 -1 0.0 1261 610/875 (70%) | Symbols: ATTPS6, TPS6 | UDP-Glycosyltransferase / trehalose-phosphatase family protein | chr1:25497493-25500241 FORWARD LENGTH=860