MLOC_11770 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains102.993104.385102.169102.597
LEAShoots from the seedlings (10 cm shoot stage)83.637282.105267.018866.7521
INF1Young developing inflorescences (5mm)349.683445.38409.941336.193
INF2Developing inflorescences (1-1.5 cm)398.392256.263302.164341.833
ROORoots from the seedlings (10 cm shoot stage)929.946782.644992.9451002.02
NODDeveloping tillers at six leaf stage, 3rd internode250.494413.786455.5931447.34
CAR5Developing grain, bracts removed (5 DPA)416.365383.065421.973389.162
CAR15Developing grain, bracts removed (15 DPA)2122.531771.371841.354297.93



CDS Structure of MLOC_11770






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11770.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK368617NoneNoneNoneNone
MLOC_11770.1CUST_1062_PI427708080AvailableAvailablecontig_1561797 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g09450.7 +3 0.0 1508 756/806 (94%) 13106.m01017 protein sucrose synthase, putative, expressed
TAIR PP10 AT3G43190.1 +3 0.0 1201 600/798 (75%) | Symbols: SUS4, ATSUS4 | sucrose synthase 4 | chr3:15179204-15182577 REVERSE LENGTH=808