MLOC_11764 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.692374.895065.349514.46178
LEAShoots from the seedlings (10 cm shoot stage)5.070372.580232.454132.88643
INF1Young developing inflorescences (5mm)20.331419.892919.283515.7821
INF2Developing inflorescences (1-1.5 cm)26.54924.000624.762126.0262
ROORoots from the seedlings (10 cm shoot stage)2.718264.846154.806865.17972
NODDeveloping tillers at six leaf stage, 3rd internode1.099161.775582.943916.47227
CAR5Developing grain, bracts removed (5 DPA)7.37757.071856.92916.53337
CAR15Developing grain, bracts removed (15 DPA)3.909423.876723.419048.17378



CDS Structure of MLOC_11764






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11764.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363416NoneNoneNoneNone
MLOC_11764.1CUST_1061_PI427708080AvailableAvailablecontig_1561783 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g28510.4 +1 0.0 1425 743/869 (86%) 13105.m02937 protein importin subunit beta, putative, expressed
TAIR PP10 AT3G08943.1 +1 0.0 1061 564/872 (65%) ARM repeat superfamily protein | chr3:2719198-2721911 REVERSE LENGTH=871