MLOC_11751 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains182.184183.138183.553203.627
LEAShoots from the seedlings (10 cm shoot stage)195.19694.6295100.516113.34
INF1Young developing inflorescences (5mm)10.97989.27827.702138.52506
INF2Developing inflorescences (1-1.5 cm)14.311613.676512.139715.7166
ROORoots from the seedlings (10 cm shoot stage)182.174155.461125.39198.325
NODDeveloping tillers at six leaf stage, 3rd internode427.535427.555303.7931253.67
CAR5Developing grain, bracts removed (5 DPA)53.090147.809347.237351.7606
CAR15Developing grain, bracts removed (15 DPA)15.962716.423818.594442.453



CDS Structure of MLOC_11751






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11751.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251045.1NoneNoneNoneNone
MLOC_11751.1CUST_1058_PI427708080AvailableAvailablecontig_1561763 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g38730.1 -1 0.0 802 427/430 (99%) 13107.m04008 protein tubulin/FtsZ domain containing protein, putative, expressed
TAIR PP10 AT5G19780.1 -1 0.0 791 419/430 (97%) | Symbols: TUA5 | tubulin alpha-5 | chr5:6687212-6688926 FORWARD LENGTH=450