MLOC_11738 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.168751.898491.91951.39124
LEAShoots from the seedlings (10 cm shoot stage)1.487861.721591.492781.14715
INF1Young developing inflorescences (5mm)1.830861.646751.09371.0546
INF2Developing inflorescences (1-1.5 cm)1.604381.481151.339791.33002
ROORoots from the seedlings (10 cm shoot stage)1.138421.758961.75321.66691
NODDeveloping tillers at six leaf stage, 3rd internode1.333061.226741.667543.87428
CAR5Developing grain, bracts removed (5 DPA)2.428951.901032.611461.77275
CAR15Developing grain, bracts removed (15 DPA)0.8915920.9248820.7442371.5653



CDS Structure of MLOC_11738






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11738.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_11738.2CUST_8837_PI427708080AvailableAvailablecontig_1561736 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g46590.1 -2 8e-136 429 219/324 (68%) 13101.m04788 protein expressed protein
TAIR PP10 AT4G20310.2 -2 4e-82 282 191/503 (38%) Peptidase M50 family protein | chr4:10961639-10963690 FORWARD LENGTH=488