MLOC_11735 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains16.467419.040417.161217.4984
LEAShoots from the seedlings (10 cm shoot stage)11.57210.289811.14088.90626
INF1Young developing inflorescences (5mm)15.198815.376816.639512.9211
INF2Developing inflorescences (1-1.5 cm)16.98215.029914.98216.9631
ROORoots from the seedlings (10 cm shoot stage)14.861618.846816.732719.8622
NODDeveloping tillers at six leaf stage, 3rd internode18.420613.756412.135242.1058
CAR5Developing grain, bracts removed (5 DPA)19.408317.538818.937617.5771
CAR15Developing grain, bracts removed (15 DPA)8.395887.186817.2606217.9217



CDS Structure of MLOC_11735






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11735.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_11735.1CUST_8836_PI427708080AvailableAvailablecontig_1561736 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g46580.1 +2 0.0 569 294/320 (92%) 13101.m04790 protein actin-related protein 2/3 complex subunit 2, putative, expressed
TAIR PP10 AT1G30825.1 +2 2e-137 405 207/315 (66%) | Symbols: ARPC2A, DIS2 | Arp2/3 complex, 34 kD subunit p34-Arc | chr1:10961106-10962999 FORWARD LENGTH=318