MLOC_11734 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.773879.702679.226589.54992
LEAShoots from the seedlings (10 cm shoot stage)2.373132.840523.475832.49678
INF1Young developing inflorescences (5mm)13.937821.389411.985613.5033
INF2Developing inflorescences (1-1.5 cm)13.23414.12411.14314.5227
ROORoots from the seedlings (10 cm shoot stage)2.813743.640253.235884.08572
NODDeveloping tillers at six leaf stage, 3rd internode15.52616.24511.937946.8817
CAR5Developing grain, bracts removed (5 DPA)11.88989.780378.695559.86
CAR15Developing grain, bracts removed (15 DPA)0.6845390.6947960.8126841.78399



CDS Structure of MLOC_11734






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11734.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK354334NoneNoneNoneNone
MLOC_11734.3CUST_1055_PI427708080AvailableAvailablecontig_1561736 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g46570.1 +1 0.0 954 527/614 (86%) 13101.m04786 protein CTP synthase, putative, expressed
TAIR PP10 AT3G12670.1 +1 0.0 802 451/614 (73%) | Symbols: emb2742 | CTP synthase family protein | chr3:4020351-4024086 REVERSE LENGTH=591