MLOC_1172 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains19.292624.971629.68780
LEAShoots from the seedlings (10 cm shoot stage)24.030128.979416.40820
INF1Young developing inflorescences (5mm)8.4055210.697512.14470
INF2Developing inflorescences (1-1.5 cm)9.284358.33649.068450
ROORoots from the seedlings (10 cm shoot stage)19.357818.36469.0370
NODDeveloping tillers at six leaf stage, 3rd internode26.647834.972230.31830
CAR5Developing grain, bracts removed (5 DPA)45.142938.165542.21050
CAR15Developing grain, bracts removed (15 DPA)4.194674.314074.458770



CDS Structure of MLOC_1172






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK252929.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252929.1CUST_19211_PI427708080NoneNoneNone
MLOC_1172.2NoneAvailableNonecontig_11010 (Not mapped)
MLOC_2974.3NoneAvailableNonecontig_126735 (Mapped)
MLOC_63961.1NoneAvailableNonecontig_48193 (Mapped)
MLOC_9784.1NoneAvailableAvailablecontig_1557783 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----