MLOC_11692 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.036828.612168.767138.4736
LEAShoots from the seedlings (10 cm shoot stage)117.452291.887259.58169.237
INF1Young developing inflorescences (5mm)9.8575510.281710.46888.20274
INF2Developing inflorescences (1-1.5 cm)9.7096911.58711.920611.4456
ROORoots from the seedlings (10 cm shoot stage)2.548633.3335.981913.76644
NODDeveloping tillers at six leaf stage, 3rd internode11.058310.082122.022734.0389
CAR5Developing grain, bracts removed (5 DPA)25.54629.934729.902626.2329
CAR15Developing grain, bracts removed (15 DPA)4.097893.729963.240588.67967



CDS Structure of MLOC_11692






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11692.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357510NoneNoneNoneNone
MLOC_11692.1CUST_1050_PI427708080AvailableAvailablecontig_1561639 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g11780.1 -1 5e-176 507 280/306 (92%) 13105.m01277 protein mitochondrial carrier protein, putative, expressed
TAIR PP10 AT5G19760.1 -1 8e-151 442 238/292 (82%) Mitochondrial substrate carrier family protein | chr5:6679591-6681845 REVERSE LENGTH=298