MLOC_11691 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.9902390.9266220.9390951.01092
LEAShoots from the seedlings (10 cm shoot stage)0.06160510.1106040.5496920.205057
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)4.566733.045282.845123.62607
NODDeveloping tillers at six leaf stage, 3rd internode0.7597420.1794640.6089220.648969
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0.02564450.06177450.03683560.126762



CDS Structure of MLOC_11691






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11691.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_11691.1CUST_8831_PI427708080AvailableAvailablecontig_1561639 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g10870.1 -1 0.0 641 392/514 (76%) 13101.m01173 protein CAMK_KIN1/SNF1/Nim1_like.7 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
TAIR PP10 AT4G18700.1 -1 4e-155 462 266/497 (54%) | Symbols: CIPK12, SnRK3.9, ATWL4, WL4 | CBL-interacting protein kinase 12 | chr4:10289110-10290579 REVERSE LENGTH=489