MLOC_11690 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.4317870.1621570.365753
LEAShoots from the seedlings (10 cm shoot stage)0.388373000.394876
INF1Young developing inflorescences (5mm)1.786430.9874060.2635220.830712
INF2Developing inflorescences (1-1.5 cm)1.525742.213041.172121.63913
ROORoots from the seedlings (10 cm shoot stage)00.36800900.804398
NODDeveloping tillers at six leaf stage, 3rd internode0.09323990.1239310.03174390.288758
CAR5Developing grain, bracts removed (5 DPA)0.6797290.4094020.6133320.459203
CAR15Developing grain, bracts removed (15 DPA)0.2342750.1226810.1711130.383539



CDS Structure of MLOC_11690






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11690.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_11690.1NoneAvailableAvailablecontig_1561636 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g08640.1 +1 2e-41 108 62/152 (41%) 13107.m00857 protein retrotransposon protein, putative, unclassified
TAIR PP10None-----