MLOC_11655 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains16.108513.88112.064912.7168
LEAShoots from the seedlings (10 cm shoot stage)19.971613.984518.398414.0124
INF1Young developing inflorescences (5mm)11.441610.74712.14918.22771
INF2Developing inflorescences (1-1.5 cm)5.376136.215896.105465.60561
ROORoots from the seedlings (10 cm shoot stage)4.326854.57666.363035.10477
NODDeveloping tillers at six leaf stage, 3rd internode7.909817.360911.550425.4867
CAR5Developing grain, bracts removed (5 DPA)9.688839.9345811.5078.43893
CAR15Developing grain, bracts removed (15 DPA)0.8180150.7770731.128581.64541



CDS Structure of MLOC_11655






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11655.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_11655.1NoneAvailableAvailablecontig_1561570 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g18210.1 +1 4e-61 203 93/98 (95%) 13101.m01978 protein peptidyl-prolyl cis-trans isomerase, putative, expressed
TAIR PP10 AT3G62030.3 +1 6e-45 160 74/97 (76%) | Symbols: ROC4 | rotamase CYP 4 | chr3:22973708-22975139 FORWARD LENGTH=259