MLOC_11634 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains31.4426.32942.112732.8319
LEAShoots from the seedlings (10 cm shoot stage)2.038157.0035411.95156.23183
INF1Young developing inflorescences (5mm)00.07891480.04614190.0584819
INF2Developing inflorescences (1-1.5 cm)000.08629910.113774
ROORoots from the seedlings (10 cm shoot stage)6.431942.389941.869173.60674
NODDeveloping tillers at six leaf stage, 3rd internode0.2909330.6793830.7437842.2286
CAR5Developing grain, bracts removed (5 DPA)0.6750050.4788280.5041460.569441
CAR15Developing grain, bracts removed (15 DPA)3.136781.305941.860495.2546



CDS Structure of MLOC_11634






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11634.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_11634.2CUST_8819_PI427708080AvailableAvailablecontig_1561504 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g17480.1 -2 4e-130 378 181/232 (78%) 13103.m02085 protein IN2-1 protein, putative, expressed
TAIR PP10 AT5G02790.1 -2 6e-83 256 123/226 (54%) | Symbols: GSTL3 | Glutathione S-transferase family protein | chr5:632877-634858 FORWARD LENGTH=235