MLOC_1163 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3404480.7008810.3144250.421505
LEAShoots from the seedlings (10 cm shoot stage)0.5711460.18841.195690.61404
INF1Young developing inflorescences (5mm)0.2121480.4182751.989070.44385
INF2Developing inflorescences (1-1.5 cm)2.884091.390031.777331.90354
ROORoots from the seedlings (10 cm shoot stage)0.5532760.2096820.362390.33024
NODDeveloping tillers at six leaf stage, 3rd internode0.1952010.2441450.3079940.75566
CAR5Developing grain, bracts removed (5 DPA)1.337020.7334310.9346250.843945
CAR15Developing grain, bracts removed (15 DPA)0.7010650.7123850.5212511.33886



CDS Structure of MLOC_1163






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK354961
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK354961CUST_23744_PI427708080NoneNoneNone
MLOC_1163.1NoneAvailableAvailablecontig_109939 (Mapped)
MLOC_35907.1NoneAvailableNonecontig_2525617 (Not mapped)
MLOC_49873.2NoneAvailableNonecontig_349957 (Not mapped)
MLOC_60670.1NoneAvailableNonecontig_446468 (Not mapped)
MLOC_76761.1NoneAvailableNonecontig_727749 (Not mapped)
MLOC_81886.1NoneAvailableNonecontig_987106 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----