MLOC_1157 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.206613.739613.30650
LEAShoots from the seedlings (10 cm shoot stage)7.737457.904275.934910
INF1Young developing inflorescences (5mm)15.100716.560614.51550
INF2Developing inflorescences (1-1.5 cm)10.828510.3629.497460
ROORoots from the seedlings (10 cm shoot stage)15.19916.73713.13470
NODDeveloping tillers at six leaf stage, 3rd internode9.20679.0212911.49910
CAR5Developing grain, bracts removed (5 DPA)12.926512.398413.81510
CAR15Developing grain, bracts removed (15 DPA)3.452912.00471.717090



CDS Structure of MLOC_1157






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK251112.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251112.1CUST_13574_PI427708083NoneNoneNone
MLOC_1157.1NoneAvailableNonecontig_10988 (Mapped)
MLOC_16649.1NoneAvailableNonecontig_1574075 (Mapped)
MLOC_25366.1NoneAvailableNonecontig_16873 (Not mapped)
MLOC_26501.1NoneAvailableAvailablecontig_176107 (Mapped)
MLOC_30261.1NoneAvailableNonecontig_2078155 (Not mapped)
MLOC_42453.1NoneAvailableNonecontig_2645461 (Not mapped)
MLOC_49714.1NoneAvailableNonecontig_346785 (Not mapped)
MLOC_49769.1NoneAvailableNonecontig_348054 (Not mapped)
MLOC_54307.1NoneAvailableNonecontig_390402 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----