MLOC_11568 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.055815.198512.863713.6954
LEAShoots from the seedlings (10 cm shoot stage)12.55595.224976.995727.46676
INF1Young developing inflorescences (5mm)37.712940.626443.63234.2626
INF2Developing inflorescences (1-1.5 cm)29.715738.693230.791337.7185
ROORoots from the seedlings (10 cm shoot stage)6.7313511.280910.79313.5433
NODDeveloping tillers at six leaf stage, 3rd internode21.503824.86415.171781.0142
CAR5Developing grain, bracts removed (5 DPA)11.31712.890312.026912.1702
CAR15Developing grain, bracts removed (15 DPA)0.8455130.7235951.190872.00554



CDS Structure of MLOC_11568






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11568.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370443NoneNoneNoneNone
MLOC_11568.1CUST_1041_PI427708080AvailableAvailablecontig_1561361 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g43580.1 -2 0.0 1090 611/710 (86%) 13101.m04506 protein kinesin motor domain containing protein, putative, expressed
TAIR PP10 AT3G16060.1 -2 0.0 699 426/677 (63%) ATP binding microtubule motor family protein | chr3:5447503-5451196 FORWARD LENGTH=684