- Predicted Gene MLOC_11530
MLOC_11530 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 13.5646 | 20.1827 | 19.3611 | 17.6006 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 22.6694 | 14.2141 | 13.9096 | 14.4969 |
| INF1 | Young developing inflorescences (5mm) | 20.423 | 17.0397 | 18.3299 | 14.9221 |
| INF2 | Developing inflorescences (1-1.5 cm) | 20.6732 | 21.5592 | 20.6933 | 21.8238 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 18.1675 | 20.9688 | 19.032 | 23.8294 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 21.696 | 20.1983 | 18.5054 | 64.9821 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 25.5955 | 24.0361 | 25.7976 | 22.8362 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 8.62412 | 8.18549 | 7.93229 | 17.6796 |
CDS Structure of MLOC_11530
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_11530.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g38110.1 |
-2 |
0.0 |
1525 |
810/872 (93%) |
13112.m03924 protein importin subunit beta, putative, expressed |
| TAIR PP10 |
AT5G53480.1 |
-2 |
0.0 |
1316 |
687/871 (79%) |
ARM repeat superfamily protein | chr5:21714016-21716709 FORWARD LENGTH=870 |