- Predicted Gene MLOC_11525
MLOC_11525 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.27639 | 2.23484 | 2.21008 | 1.61009 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 2.71094 | 3.18914 | 1.94826 | 1.89467 |
| INF1 | Young developing inflorescences (5mm) | 2.9023 | 3.02887 | 4.29706 | 2.38307 |
| INF2 | Developing inflorescences (1-1.5 cm) | 2.54232 | 2.35842 | 2.10773 | 2.3381 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.515205 | 1.30012 | 1.07867 | 1.11429 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 5.18796 | 2.63632 | 2.17927 | 6.79151 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 2.72062 | 4.27184 | 2.76686 | 2.7374 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.35834 | 0.834626 | 0.677554 | 2.21336 |
CDS Structure of MLOC_11525
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_11525.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g25440.1 |
+2 |
7e-33 |
129 |
61/79 (77%) |
13101.m02694 protein thiamin pyrophosphokinase 1, putative, expressed |
| TAIR PP10 |
AT2G44750.1 |
+2 |
3e-16 |
80 |
38/66 (58%) |
| Symbols: TPK2 | thiamin pyrophosphokinase 2 | chr2:18451510-18452754 FORWARD LENGTH=265 |