MLOC_11524 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.2637.986556.665929.29292
LEAShoots from the seedlings (10 cm shoot stage)6.9455413.381629.152414.9561
INF1Young developing inflorescences (5mm)0.5590580.4979130.4822260.494593
INF2Developing inflorescences (1-1.5 cm)0.1250790.05916140.07566430.107061
ROORoots from the seedlings (10 cm shoot stage)18.6755.0590811.16039.83129
NODDeveloping tillers at six leaf stage, 3rd internode0.3778230.04241980.09474870.153138
CAR5Developing grain, bracts removed (5 DPA)3.898423.375814.488464.55566
CAR15Developing grain, bracts removed (15 DPA)100.261106.39766.1051261.14



CDS Structure of MLOC_11524






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11524.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369899NoneNoneNoneNone
MLOC_11524.1CUST_1029_PI427708080AvailableAvailablecontig_1561284 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g17330.1 +2 1e-48 158 72/88 (82%) 13107.m01817 protein B12D protein, putative, expressed
TAIR PP10 AT3G48140.1 +2 1e-33 118 52/83 (63%) B12D protein | chr3:17778471-17779299 FORWARD LENGTH=88