MLOC_11518 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.2513350.2488920.140301
LEAShoots from the seedlings (10 cm shoot stage)0.2999330.4768630.04837870.198078
INF1Young developing inflorescences (5mm)0.1007730.09892380.04175450.058986
INF2Developing inflorescences (1-1.5 cm)0.3517280.1996030.1887290.233079
ROORoots from the seedlings (10 cm shoot stage)00.1023540.3451770.0995104
NODDeveloping tillers at six leaf stage, 3rd internode0.03087230.08439510.04672080.221132
CAR5Developing grain, bracts removed (5 DPA)0.1664850.1811380.2268780.142947
CAR15Developing grain, bracts removed (15 DPA)0.2222720.14900800.309653



CDS Structure of MLOC_11518






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11518.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_11518.3NoneAvailableAvailablecontig_1561275 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g48000.1 -3 6e-55 132 67/135 (50%) 13107.m05128 protein retrotransposon protein, putative, unclassified, expressed
TAIR PP10None-----