- Predicted Gene MLOC_11517
MLOC_11517 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.0307681 | 0.101816 | 0.146422 | 0.0922384 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.303748 | 0.383641 | 0.225892 | 0.24664 |
| INF1 | Young developing inflorescences (5mm) | 0.136219 | 0.0996216 | 0.143502 | 0.103833 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.297896 | 0.102127 | 0.194918 | 0.203312 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.0545468 | 0.152974 | 0.0792976 | 0.139186 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.0414886 | 0.0534286 | 0.0644909 | 0.149016 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.267872 | 0.151343 | 0.251003 | 0.197743 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.309132 | 0.103941 | 0.207649 | 0.496779 |
CDS Structure of MLOC_11517
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_11517.4
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os10g42880.1 |
+1 |
1e-47 |
112 |
49/111 (44%) |
13110.m04052 protein retrotransposon protein, putative, unclassified |
| TAIR PP10 | None | - | - | - | - | - |