- Predicted Gene MLOC_11500
MLOC_11500 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 2.26318 | 2.24471 | 2.02758 | 1.85898 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.28362 | 2.48844 | 2.38004 | 1.48161 |
INF1 | Young developing inflorescences (5mm) | 3.29611 | 4.14973 | 4.10744 | 2.62381 |
INF2 | Developing inflorescences (1-1.5 cm) | 3.80578 | 3.98945 | 4.48487 | 3.78132 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.81879 | 2.04024 | 2.32687 | 2.13986 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.0805576 | 0.343461 | 0.517465 | 1.19016 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.16262 | 1.64313 | 1.33085 | 1.12851 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.27181 | 0.961194 | 1.26826 | 2.15451 |
CDS Structure of MLOC_11500
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_11500.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g22870.1 |
-1 |
8e-60 |
206 |
118/148 (80%) |
13104.m02123 protein rpp14 family protein, expressed |
TAIR PP10 |
AT1G04635.1 |
-1 |
2e-44 |
155 |
73/110 (66%) |
| Symbols: EMB1687 | ribonuclease P family protein / Rpp14 family protein | chr1:1291350-1291805 FORWARD LENGTH=151 |