MLOC_11495 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.274326.020276.50546.84177
LEAShoots from the seedlings (10 cm shoot stage)2.299340.2908460.8067261.04278
INF1Young developing inflorescences (5mm)18.272222.18124.799618.6777
INF2Developing inflorescences (1-1.5 cm)15.34919.661522.33720.9209
ROORoots from the seedlings (10 cm shoot stage)9.714735.314618.16537.22636
NODDeveloping tillers at six leaf stage, 3rd internode0.677130.8725682.718354.39169
CAR5Developing grain, bracts removed (5 DPA)4.095634.48663.853584.07052
CAR15Developing grain, bracts removed (15 DPA)0.4744230.2827530.129010.800963



CDS Structure of MLOC_11495






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11495.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_11495.2CUST_11338_PI427708083AvailableAvailablecontig_1561240 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g39410.1 +2 3e-13 69 32/32 (100%) 13110.m03607 protein Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed
TAIR PP10 AT1G07660.2 +2 9e-14 69 32/32 (100%) Histone superfamily protein | chr1:2369212-2369523 FORWARD LENGTH=86