- Predicted Gene MLOC_11487
MLOC_11487 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 2.30901 | 5.604 | 4.29357 | 3.88693 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.91353 | 1.63654 | 1.87961 | 2.08819 |
INF1 | Young developing inflorescences (5mm) | 4.80357 | 3.95686 | 4.80291 | 3.29539 |
INF2 | Developing inflorescences (1-1.5 cm) | 5.02535 | 5.11255 | 4.64944 | 4.91119 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.08001 | 3.45724 | 3.39714 | 3.2751 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.3205 | 3.24457 | 2.45967 | 9.52834 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.61717 | 2.44019 | 2.68169 | 2.22444 |
CAR15 | Developing grain, bracts removed (15 DPA) | 6.28424 | 6.39682 | 5.47417 | 11.8707 |
CDS Structure of MLOC_11487
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_11487.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g41660.1 |
-1 |
0.0 |
781 |
502/1241 (40%) |
13106.m04350 protein CC-NBS-LRR protein, putative, expressed |
TAIR PP10 |
AT3G14460.1 |
-1 |
1e-88 |
320 |
356/1292 (28%) |
LRR and NB-ARC domains-containing disease resistance protein | chr3:4851990-4856264 REVERSE LENGTH=1424 |