MLOC_11433 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.402340.1509870.4152610.583804
LEAShoots from the seedlings (10 cm shoot stage)000.269290.258602
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)5.133853.089822.216634.00067
NODDeveloping tillers at six leaf stage, 3rd internode000.04413460.104357
CAR5Developing grain, bracts removed (5 DPA)0.4690330.2893170.3122270.374915
CAR15Developing grain, bracts removed (15 DPA)0.12348000.440287



CDS Structure of MLOC_11433






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11433.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_11433.1CUST_1763_PI427708083AvailableAvailablecontig_1561076 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g01400.1 -3 6e-28 107 51/68 (75%) 13107.m00049 protein peroxidase precursor, putative, expressed
TAIR PP10 AT5G15180.1 -3 1e-13 66 33/67 (49%) Peroxidase superfamily protein | chr5:4930561-4932211 FORWARD LENGTH=329