- Predicted Gene MLOC_11420
MLOC_11420 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 10.2159 | 6.60209 | 7.04095 | 7.62157 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 8.18313 | 2.44529 | 4.99177 | 4.61494 |
| INF1 | Young developing inflorescences (5mm) | 22.4936 | 23.2284 | 29.9351 | 21.6674 |
| INF2 | Developing inflorescences (1-1.5 cm) | 30.0262 | 30.8489 | 33.1043 | 34.0749 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 10.8842 | 9.07334 | 8.19169 | 10.8749 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 3.97362 | 7.07369 | 12.1048 | 26.2326 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 7.27494 | 7.13259 | 9.17182 | 7.48644 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 7.91829 | 7.5453 | 8.94414 | 18.3793 |
CDS Structure of MLOC_11420
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_11420.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g10080.1 |
+1 |
3e-158 |
455 |
227/283 (80%) |
13102.m01114 protein zinc finger C-x8-C-x5-C-x3-H type family protein, expressed |
| TAIR PP10 |
AT3G12130.1 |
+1 |
6e-68 |
220 |
131/280 (47%) |
KH domain-containing protein / zinc finger (CCCH type) family protein | chr3:3864486-3866406 REVERSE LENGTH=248 |