- Predicted Gene MLOC_11412
MLOC_11412 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_11412_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_11412_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 5.9026 | 7.77141 | 7.79348 | 7.25122 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.74 | 16.5587 | 33.843 | 14.5241 |
INF1 | Young developing inflorescences (5mm) | 0.236185 | 0.21854 | 0.123432 | 0.173508 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.873062 | 1.35379 | 1.39959 | 1.30164 |
ROO | Roots from the seedlings (10 cm shoot stage) | 10.5378 | 12.5629 | 12.6619 | 13.6175 |
NOD | Developing tillers at six leaf stage, 3rd internode | 6.26492 | 9.33357 | 6.48225 | 26.0729 |
CAR5 | Developing grain, bracts removed (5 DPA) | 4.67835 | 4.08868 | 4.47496 | 4.21651 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.24193 | 1.38186 | 1.62189 | 3.27141 |
CDS Structure of MLOC_11412
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_11412.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g30490.1 |
+3 |
0.0 |
700 |
383/478 (80%) |
13104.m02894 protein MATE efflux family protein, putative, expressed |
TAIR PP10 |
AT5G52450.1 |
+3 |
6e-170 |
501 |
290/468 (62%) |
MATE efflux family protein | chr5:21289042-21291749 REVERSE LENGTH=486 |