MLOC_11387 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains15.100712.143613.9550
LEAShoots from the seedlings (10 cm shoot stage)53.289471.587974.40660
INF1Young developing inflorescences (5mm)15.453612.795314.04690
INF2Developing inflorescences (1-1.5 cm)10.770212.954911.21260
ROORoots from the seedlings (10 cm shoot stage)4.311589.673546.098410
NODDeveloping tillers at six leaf stage, 3rd internode17.155718.963219.83910
CAR5Developing grain, bracts removed (5 DPA)17.260115.941518.03210
CAR15Developing grain, bracts removed (15 DPA)3.318154.028741.832250



CDS Structure of MLOC_11387






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK355166
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355166CUST_23768_PI427708080NoneNoneNone
MLOC_11387.1NoneAvailableNonecontig_1560959 (Mapped)
MLOC_16736.1NoneAvailableNonecontig_1574320 (Mapped)
MLOC_44731.1NoneAvailableNonecontig_275264 (Mapped)
MLOC_64060.1NoneAvailableAvailablecontig_48323 (Mapped)
MLOC_878.1NoneAvailableNonecontig_1071560 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----