MLOC_11370 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.577455.442165.00534.44953
LEAShoots from the seedlings (10 cm shoot stage)5.216884.191754.455983.75628
INF1Young developing inflorescences (5mm)6.287946.158386.828024.85534
INF2Developing inflorescences (1-1.5 cm)9.671629.319538.747249.32256
ROORoots from the seedlings (10 cm shoot stage)3.400924.879294.410855.06736
NODDeveloping tillers at six leaf stage, 3rd internode4.146855.29593.2237614.94
CAR5Developing grain, bracts removed (5 DPA)7.389956.985676.704776.1937
CAR15Developing grain, bracts removed (15 DPA)5.230344.985855.0211610.3397



CDS Structure of MLOC_11370






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11370.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356159NoneNoneNoneNone
MLOC_11370.1CUST_1014_PI427708080AvailableAvailablecontig_1560930 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g28310.1 -2 0.0 887 499/753 (66%) 13103.m03304 protein dnaJ domain containing protein, expressed
TAIR PP10 AT5G53150.1 -2 2e-79 281 147/318 (46%) DNAJ heat shock N-terminal domain-containing protein | chr5:21554935-21557202 FORWARD LENGTH=726