MLOC_1136 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.08629380.1401880.0516612
LEAShoots from the seedlings (10 cm shoot stage)00.1633520.1322270.061932
INF1Young developing inflorescences (5mm)0.4699850.6358370.4697650.343914
INF2Developing inflorescences (1-1.5 cm)0.06766610.062437500.0483354
ROORoots from the seedlings (10 cm shoot stage)00.18071800.122094
NODDeveloping tillers at six leaf stage, 3rd internode0.0888150.08167760.2057480.282127
CAR5Developing grain, bracts removed (5 DPA)0.1717550.1544200.0943622
CAR15Developing grain, bracts removed (15 DPA)0.09746930.0982370.2899090.233839



CDS Structure of MLOC_1136






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_1136.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_1136.1NoneAvailableAvailablecontig_109725 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g12760.1 -3 2e-15 75 32/58 (55%) 13105.m01388 protein retrotransposon protein, putative, unclassified
TAIR PP10None-----