MLOC_11345 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains44.886638.709739.264642.3795
LEAShoots from the seedlings (10 cm shoot stage)23.13627.125926.036921.1979
INF1Young developing inflorescences (5mm)0.3219750.2518050.3626990.292435
INF2Developing inflorescences (1-1.5 cm)0.273340.09264450.3256480.253871
ROORoots from the seedlings (10 cm shoot stage)68.177854.153443.460963.9781
NODDeveloping tillers at six leaf stage, 3rd internode36.579522.286939.086271.5447
CAR5Developing grain, bracts removed (5 DPA)34.123830.00826.904631.9221
CAR15Developing grain, bracts removed (15 DPA)3.339583.958013.600759.74827



CDS Structure of MLOC_11345






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11345.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362883NoneNoneNoneNone
MLOC_11345.4CUST_1013_PI427708080AvailableAvailablecontig_1560890 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g63270.1 +2 0.0 587 289/366 (79%) 13103.m07013 protein regulatory protein, putative, expressed
TAIR PP10 AT1G14590.1 +2 9e-98 308 150/301 (50%) Nucleotide-diphospho-sugar transferase family protein | chr1:4998957-5000617 REVERSE LENGTH=386