MLOC_11340 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.105491.052120.6152231.07961
LEAShoots from the seedlings (10 cm shoot stage)1.025970.8302091.353730.947281
INF1Young developing inflorescences (5mm)1.838851.996382.825072.17946
INF2Developing inflorescences (1-1.5 cm)1.906611.607441.008171.96688
ROORoots from the seedlings (10 cm shoot stage)4.662691.446481.004452.23101
NODDeveloping tillers at six leaf stage, 3rd internode1.11554.858473.7582813.4245
CAR5Developing grain, bracts removed (5 DPA)1.024121.570381.190991.52282
CAR15Developing grain, bracts removed (15 DPA)0.127920.09906370.5605170.709979



CDS Structure of MLOC_11340






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK369072
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369072CUST_21731_PI427708080NoneNoneNone
MLOC_11340.1NoneAvailableAvailablecontig_1560859 (Mapped)
MLOC_56965.1NoneAvailableNonecontig_41291 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----