- Predicted Gene MLOC_11338
MLOC_11338 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.32686 | 1.88765 | 1.92215 | 1.98808 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.514096 | 0.448269 | 0.533587 | 0.440239 |
| INF1 | Young developing inflorescences (5mm) | 0.876113 | 1.2555 | 1.08344 | 0.886943 |
| INF2 | Developing inflorescences (1-1.5 cm) | 2.0991 | 2.26559 | 2.50288 | 2.37759 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.88252 | 1.30913 | 1.38499 | 1.87506 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.860182 | 1.58705 | 2.24446 | 5.95994 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 7.91614 | 7.64608 | 7.51189 | 7.12495 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 11.1639 | 10.3775 | 7.88005 | 22.316 |
CDS Structure of MLOC_11338
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_11338.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g28690.2 |
+1 |
7e-97 |
314 |
164/297 (55%) |
13101.m02986 protein nucleoporin autopeptidase domain containing protein, expressed |
| TAIR PP10 |
AT1G10390.2 |
+1 |
7e-57 |
208 |
96/158 (61%) |
Nucleoporin autopeptidase | chr1:3407265-3412045 REVERSE LENGTH=1041 |