MLOC_11324 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.016542900.0217096
LEAShoots from the seedlings (10 cm shoot stage)0.03211020.03151050.04959030.0255937
INF1Young developing inflorescences (5mm)00.017469700.0209528
INF2Developing inflorescences (1-1.5 cm)00.01243170.03835020.0210204
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0.01732240.003826470.01984910.0205062
CAR5Developing grain, bracts removed (5 DPA)0.1663790.2416590.2125680.152038
CAR15Developing grain, bracts removed (15 DPA)5.675284.102635.815468.84693



CDS Structure of MLOC_11324






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11324.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_11324.1NoneAvailableAvailablecontig_1560836 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g06860.1 -3 3e-82 284 142/302 (47%) 13103.m00756 protein transposon protein, putative, unclassified, expressed
TAIR PP10 AT4G38180.1 -3 3e-45 177 100/299 (33%) | Symbols: FRS5 | FAR1-related sequence 5 | chr4:17906702-17909404 REVERSE LENGTH=788