MLOC_11310 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.326530.487722.143922.6539
LEAShoots from the seedlings (10 cm shoot stage)32.874527.933219.723924.6163
INF1Young developing inflorescences (5mm)69.558968.647956.547455.8152
INF2Developing inflorescences (1-1.5 cm)102.33583.219469.063797.6008
ROORoots from the seedlings (10 cm shoot stage)8.4099417.733612.980221.4795
NODDeveloping tillers at six leaf stage, 3rd internode8.8824913.7327.7164446.0887
CAR5Developing grain, bracts removed (5 DPA)47.615735.779445.414642.5938
CAR15Developing grain, bracts removed (15 DPA)44.469939.682342.847396.846



CDS Structure of MLOC_11310






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11310.6
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK368569NoneNoneNoneNone
MLOC_11310.6CUST_17900_PI427708080AvailableAvailablecontig_1560776 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g14406.1 +3 0.0 631 333/440 (76%) 13106.m01592 protein SYD, putative, expressed
TAIR PP10 AT2G28290.2 +3 0.0 640 406/539 (75%) | Symbols: SYD, CHR3 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr2:12056771-12072950 FORWARD LENGTH=3529