MLOC_113 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains687.561537.124780.216632.958
LEAShoots from the seedlings (10 cm shoot stage)136.635150.041143.723120.98
INF1Young developing inflorescences (5mm)1.894423.925022.778862.28252
INF2Developing inflorescences (1-1.5 cm)5.743212.721543.011244.02034
ROORoots from the seedlings (10 cm shoot stage)362.951363.978703.627484.514
NODDeveloping tillers at six leaf stage, 3rd internode460.225285.02431.872985.447
CAR5Developing grain, bracts removed (5 DPA)7.610917.32166.017856.53141
CAR15Developing grain, bracts removed (15 DPA)2.000592.73261.859554.79638



CDS Structure of MLOC_113






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_113.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252232.1NoneNoneNoneNone
MLOC_113.1CUST_9_PI427708080AvailableAvailablecontig_100719 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g73940.1 +1 2e-16 75 43/89 (48%) 13101.m08075 protein expressed protein
TAIR PP10None-----