- Predicted Gene MLOC_11295
MLOC_11295 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 4.67748 | 12.2679 | 11.5609 | 8.82885 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 13.3389 | 11.2303 | 10.6487 | 9.49423 |
| INF1 | Young developing inflorescences (5mm) | 21.6582 | 19.5195 | 20.5927 | 15.1717 |
| INF2 | Developing inflorescences (1-1.5 cm) | 24.0476 | 24.1452 | 25.0089 | 23.6702 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 4.40606 | 11.3302 | 8.85224 | 10.8458 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 3.87105 | 6.44214 | 6.50155 | 20.7315 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 16.8077 | 14.7773 | 16.5632 | 13.5861 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 8.14522 | 7.52043 | 7.03153 | 15.0895 |
CDS Structure of MLOC_11295
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_11295.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g37890.1 |
+1 |
0.0 |
2066 |
1124/1642 (68%) |
13112.m03901 protein expressed protein |
| TAIR PP10 |
AT2G39580.1 |
+1 |
6e-120 |
419 |
280/819 (34%) |
CONTAINS InterPro DOMAIN/s: Putative zinc-finger domain (InterPro:IPR019607); Has 249 Blast hits to 219 proteins in 85 species: Archae - 0; Bacteria - 144; Metazoa - 29; Fungi - 8; Plants - 50; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). | chr2:16510540-16516948 FORWARD LENGTH=1577 |